Protein ZmYAB6
ZmYAB6 is a protein in the C2C2-YABBY family.
Information
TF Name: ZmYAB6
Species: Maize
TF Family: C2C2-YABBY
Gene Name(Synonym): YAB6
Uniprot ID: B4FY22
Subgenome: 2

Protein ZmYAB6

ZmYAB6 is a protein in the C2C2-YABBY family.

Overview of domains present in v5 transcripts
PF04690
Zm00001eb218500_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d013661DAPseq no logo sequence fimo position
Zm00001d013661DAPseq no logo sequence fimo position
Zm00001d013661ChIPseq no logo sequence fimo position
Zm00001d013661PChIPseq no logo sequence fimo position
Zm00001d013662DAPseq no logo sequence fimo position
Zm00001d013662DAPseq no logo sequence fimo position
Zm00001d013662ChIPseq no logo sequence fimo position
Zm00001d013662PChIPseq no logo sequence fimo position
Zm00001d013663DAPseq no logo sequence fimo position
Zm00001d013663DAPseq no logo sequence fimo position
Zm00001d013663ChIPseq no logo sequence fimo position
Zm00001d013663PChIPseq no logo sequence fimo position

Interactions where ZmYAB6 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmYAB6 is the target  
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There are 137 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb218500_T001 from maize genome v5

Amino Acid Sequence
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MSSAPLQIAPVPEHVCYVHCNFCNTILAVSVPSHSMLNIVTVRCGHCTSLLSVNLRGLIQSLPVQNHHYSQQQENFTVQN
MGFTENYPEYAPSYRMPTTLSAKGDLDHMLHVRAPEKRQRVPSAYNRFIKEEIRRIKACNPDISHREAFSTAAKNWAHFP
NIHFGLGPCESSNNLDEATGAMCHPQKVQDLY

MSSAPLQIAPVPEHVCYVHCNFCNTILAVSVPSHSMLNIVTVRCGHCTSLLSVNLRGLIQSLPVQNHHYSQQQENFTVQN
MGFTENYPEYAPSYRMPTTLSAKGDLDHMLHVRAPEKRQRVPSAYNRFIKEEIRRIKACNPDISHREAFSTAAKNWAHFP
NIHFGLGPCESSNNLDEATGAMCHPQKVQDLY

MSSAPLQIAPVPEHVCYVHCNFCNTILAVSVPSHSMLNIVTVRCGHCTSLLSVNLRGLIQSLPVQNHHYSQQQENFTVQN
MGFTENYPEYAPSYRMPTTLSAKGDLDHMLHVRAPEKRQRVPSAYNRFIKEEIRRIKACNPDISHREAFSTAAKNWAHFP
NIHFGLGPCESSNNLDEATGAMCHPQKVQDLY

MSSAPLQIAPVPEHVCYVHCNFCNTILAVSVPSHSMLNIVTVRCGHCTSLLSVNLRGLIQSLPVQNHHYSQQQENFTVQN
MGFTENYPEYAPSYRMPTTLSAKGDLDHMLHVRAPEKRQRVPSAYNRFIKEEIRRIKACNPDISHREAFSTAAKNWAHFP
NIHFGLGPCESSNNLDEATGAMCHPQKVQDLY

MSSAPLQIAPVPEHVCYVHCNFCNTILAVSVPSHSMLNIVTVRCGHCTSLLSVNLRGLIQSLPVQNHHYSQQQENFTVQN
MGFTENYPEYAPSYRMPTTLSAKGDLDHMLHVRAPEKRQRVPSAYNRFIKEEIRRIKACNPDISHREAFSTAAKNWAHFP
NIHFGLGPCESSNNLDEATGAMCHPQKVQDLY

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF04690
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Nucleotide Sequence
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AGTCGGACATAGAGAATCCTTCTAG...

GRMZM2G074124_T01 from maize genome v3

Amino Acid Sequence
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MSSAPLQIAPVPEHVCYVHCNFCNTILAENFTVQNMGFTENYPEYAPSYRMPTTLSAKGDLDHMLHVR

Nucleotide Sequence
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GCCCACATCAACCCCTTCACACGAA...

GRMZM2G074124_T02 from maize genome v3

Amino Acid Sequence
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MSSAPLQIAPVPEHVCYVHCNFCNTILAVSVPSHSMLNIVTVRCGHCTSLLSVNLRGLIQSLPVQNHHYSQQQENFTVQN
MGFTENYPEYAPSYRMPTTLSAKGDLDHMLHVR

Nucleotide Sequence
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GCCCACATCAACCCCTTCACACGAA...

GRMZM2G074124_T03 from maize genome v3

Amino Acid Sequence
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MSSAPLQIAPVPEHVCYVHCNFCNTILAENFTVQNMGFTENYPEYAPSYRMPTTLSAKGDLDHMLHVRAPEKRQRVPSAY
NRFIKEEIRRIKACNPDISHREAFSTAAKNWAHFPNIHFGLGPCESSNNLDEATGAMCHPQKVQDLY

Nucleotide Sequence
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GCCCACATCAACCCCTTCACACGAA...

GRMZM2G074124_T04 from maize genome v3


Related TFome: pUT3381

Amino Acid Sequence
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MSSAPLQIAPVPEHVCYVHCNFCNTILAVSVPSHSMLNIVTVRCGHCTSLLSVNLRGLIQSLPVQNHHYSQQQENFTVQN
MGFTENYPEYAPSYRMPTTLSAKGDLDHMLHVRAPEKRQRVPSAYNRFIKEEIRRIKACNPDISHREAFSTAAKNWAHFP
NIHFGLGPCESSNNLDEATGAMCHPQKVQDLY

Nucleotide Sequence
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GCCCACATCAACCCCTTCACACGAA...

GRMZM2G074124_T05 from maize genome v3

Amino Acid Sequence
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MSSAPLQIAPVPEHVCYVHCNFCNTILAVSVPSHSMLNIVTVRCGHCTSLLSVNLRGLIQSLPVQNHHYSQQQENFTVQN
MGFTENYPEYAPSYRMPTTLSAKGDLDHMLHVRAPEKRQRVPSAYNRFIKEEIRRIKACNPDISHREAFSTAAKNWAHFP
NIHFGLGPCESSNNLDEATGAMCHPQKVQDLY

Nucleotide Sequence
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GCCCACATCAACCCCTTCACACGAA...

Zm00001d013661_T001 from maize genome v4

Amino Acid Sequence
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MHCLREEIRRIKACNPDISHREAFSTAAKNWAHFPNIHFGLGPCESSNNLDEATGAMCHPQKVQDLY

Nucleotide Sequence
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ATGCATTGTCTTAGGGAGGAGATAC...

Zm00001d013662_T001 from maize genome v4

Amino Acid Sequence
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MSSAPLQIAPVPEHVCYVHCNFCNTILAVSVPSHSMLNIVTVRCGHCTSLLSVNLRGLIQSLPVQNHHYSQQQENFTVQN
MGFTENYPEYAPSYRMPTTLSAKGDLDHMLHVRAPEKRQRVPSAYNRFIK

Nucleotide Sequence
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ACCCCTTCACACGAACCAGATCAGA...

Zm00001d013663_T001 from maize genome v4

Amino Acid Sequence
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MSSAPLQIAPVPEHVCYVHCNFCNTILAVSVPSHSMLNIVTVRCGHCTSLLSVNLRGLIQSLPVQNHHYSQQQENFTVQN
MGFTENYPEYAPSYRMPTTLSAKGDLDHMLHVRGKLIDSYMHVYATALYILLC

Nucleotide Sequence
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TGCTTTCTCTCTCTCTCTCTCACAC...


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